c7c52e7de88cadb6b37bca2694b0830b *DESCRIPTION
900680b0d4cbc3e877c83f0c40825892 *INDEX
3d4f008f810e05969f7e6462b8b6e243 *Meta/Rd.rds
f30acf00971d9ada7c54acc70cadc855 *Meta/data.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
7461a8c695be43422bde8357adda8f33 *Meta/hsearch.rds
84db01f7b9cf1e4eadf318f50e6cb7da *Meta/links.rds
05dfbd23f80740fb4864be1e6305e8db *Meta/nsInfo.rds
318402995269a8c44f38e93368a64d7e *Meta/package.rds
ec1664b849e6b33e2795510ba1d73a61 *Meta/vignette.rds
745a248d66abbd2455d3fbd851723b27 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/segmentSeq
ef77a4ddc17d28cf12507e890684ae8e *R/segmentSeq.rdb
1e2711f2fe8c02f5edd7af256142d1be *R/segmentSeq.rdx
e0fdeb3e6f073566bf1115a64d7ebeda *data/hSL.RData
aa64b9983d25a48733870ed50d1b6b77 *doc/index.html
15f4c7df8fd84000cb3a9bf405b4e688 *doc/methylationAnalysis.R
5f7a9bccf604aff19003d3e514230544 *doc/methylationAnalysis.Rnw
f3b4295abf6a8b2147e2aef1b493f2ac *doc/methylationAnalysis.pdf
2177f37f8db17c1eaa5773248b58431d *doc/segmentSeq.R
dc3e5ea6060691ece51c17a273a3b0b5 *doc/segmentSeq.Rnw
0c82e0a47241e3d9edce94e6b02f2989 *doc/segmentSeq.pdf
3e06d773f7fc796b9f8abfbd87859c91 *extdata/SL10.txt
d4614b7e3a4b1d43982ddfb5756b3c55 *extdata/SL26.txt
b743c46dcbdbebc79f25c8402c664099 *extdata/SL32.txt
557c9c052a14cbeb5794a5d40520ee98 *extdata/SL9.txt
f9e97daa13b3f4e7b2554cfc838e20b6 *extdata/short_13_C24_col_trim.fastq_CG_methCalls.gz
6202ab9dfdfca80c02a65f4e6bb528fa *extdata/short_18B_C24_C24_trim.fastq_CG_methCalls.gz
67b74bf8edfa841d34a31dfd467c8c3f *extdata/short_Sample_17A_trimmed.fastq_CG_methCalls.gz
87ff08b3a90565b2d8b826373e30dc0e *extdata/short_Sample_28_trimmed.fastq_CG_methCalls.gz
980b344cf620586acacd236f46a7a13c *help/AnIndex
16ad457bc16c2af6af663666fa88f642 *help/aliases.rds
698b4404c576e3c7bb34d4ba460be306 *help/paths.rds
80d0d160ed57d290b4e5a1743470ab8e *help/segmentSeq.rdb
a4b603d5dfacfa51e08cc4673ba0ef46 *help/segmentSeq.rdx
75a06378191a60398cbef44c7db2c521 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
dd9e9145994478ed34bb764464e94652 *html/SL.html
9869b2b7660672cb6cb29ad6249c0ac6 *html/alignmentClass-class.html
3aa167721396df2d5d1d948e7beedfa2 *html/alignmentData-class.html
3e119cf82b379b5ba20d294124b21777 *html/alignmentMeth-class.html
117d9f76113cedd617b6bbce7efaab1b *html/averageMethylationRegions.html
7bd38337db3b916fa47b1f3ed31ed373 *html/classifySeg.html
8404c5ad48c330a33c9ecd0ce2e257fa *html/findChunks.html
2e519c0ae8b7f8f3b5f25b6470d9a65f *html/getCounts.html
af72bc795eef424e63a41f8cc2105795 *html/getOverlaps.html
207433219c2d3bcc900b18bfc1857143 *html/givenExpression.html
e1743b225366b51aef3929c03bbf2b5f *html/hSL.html
0594e1910eae854a9da6b68f3cbe6e35 *html/heuristicSeg.html
9c203815d4c25ede1e47c7b101c979b8 *html/lociData-class.html
dd47d27e57bc75e0f2fae6af74194927 *html/lociLikelihoods.html
52ddae4e640ce736190965c05e5f8d25 *html/mergeMethSegs.html
f7b086fbba5238113123c333616c8d52 *html/methData-class.html
ab099b4aa9ed976816192cb7e5e48712 *html/normaliseNC.html
f86cdeb85bf6ed53fecb529f883d6221 *html/plotGenome.html
1118a891d59927440acb9d521a4236a8 *html/plotMeth.html
83ea289d70d626f64ef024ba69af9aa9 *html/plotMethDistribution.html
55b371cd5b8ad0544e93ef4770ba27ec *html/processAD.html
b0bf63fd07fe321505c0b1a62761c1a7 *html/readMethods.html
44b8dd147c08fe9edadff100af5700d6 *html/readMeths.html
c835e465eab4340554a2ee5fab7d851f *html/segClass-class.html
c01a2df1789fa1e6c2b0148f210221c4 *html/segData-class.html
76d22da845e3ad19b30fe8713fd97709 *html/segMeth-class.html
f6433c563127d74c46fe9ef69f4829a5 *html/segmentSeq-package.html
abe59483a1ce4b2840394f813080313c *html/selectLoci.html
917fefd0b9adb59d34b81dbded729bb1 *html/summariseLoci.html
64685155eac750c26ca7bcfea1617162 *html/thresholdFinder.html
