83a2b6fc667d32a5b0f01e376e75189f *CITATION
890ee6f3e3fd00b7a980afe45f282b5f *DESCRIPTION
cfbe91807c6f63cc7df0574b8edca909 *INDEX
2f740013bfd359883745585d1d1575cb *Meta/Rd.rds
f60b6e183375df5338161587de5a4095 *Meta/data.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
8e635832b65a1dd1aa0826eb2d7a2310 *Meta/hsearch.rds
071366c57a7ecf0b5656acf9785ad8f6 *Meta/links.rds
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6ea867c06c9c305b5f7f17506847499e *Meta/package.rds
ec2f968eaeabce47d2e6b1a8bc856835 *Meta/vignette.rds
9cb245f3b6f827bc58d20e4ab8fb9997 *NAMESPACE
9132f851662db76100a357bab3df8769 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/rBiopaxParser
3216982f71a03a5340ddebb5b9b4e5aa *R/rBiopaxParser.rdb
3598852b9964d2133c6b5092a1bc4a1d *R/rBiopaxParser.rdx
a2cacd4e504b743f3c2ae829a6199854 *data/biopaxLevel3Example.RData
4d457ce88c677a32d0a0d8b22d12c911 *data/biopaxexample.rda
12be2f65bbcfb5bab7cb0fca76f01295 *doc/index.html
26497d2f36f9829a2951fa4f3d18c48d *doc/rBiopaxParserVignette.R
2c60f2d900df4798b76e963621beaf1f *doc/rBiopaxParserVignette.Rnw
1cc7b82621c46d4501ea24532c24f417 *doc/rBiopaxParserVignette.pdf
4764424737cd41c5c52a3d339e55141c *help/AnIndex
200df747ecd902a99ba612ac4dc2b690 *help/aliases.rds
a990ef162ad79745ae2bd718fecf3427 *help/paths.rds
98ef411f1a28f39d7a0dead450cd72a1 *help/rBiopaxParser.rdb
46e2c9eb771f436bd8d8a3b4466d03d2 *help/rBiopaxParser.rdx
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689c6d2cf5f9e313d78ec4a0226e37ad *html/CLASS_INHERITANCE_BP3.html
667706683ba322189ed33c0ef86003cc *html/CLASS_PROPERTIES_BP2.html
577d8509c690e75b66e0f61bafc1fbfa *html/CLASS_PROPERTIES_BP3.html
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7d2511f7252f3a3ed23b29939d170407 *html/addBiochemicalReaction.html
86801397e78a4a5334c6a4fa4c81627d *html/addBiopaxInstance.html
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a9ad5a72ea43bbf3ecbaf7508b8904ee *html/addPathway.html
29448916015d5d395442bce5cc3aaf9b *html/addPathwayComponents.html
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35473807edc35e904a49ba760a91e5c6 *html/addPropertiesToBiopaxInstance.html
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7cd5872ee970d0a9dabab06133a989fe *html/biopax.html
e6106d1019807358b8dc0a943e4b1590 *html/calcGraphOverlap.html
68678518c63ceca7b160f8ea97ef93eb *html/checkValidity.html
e3cc1f680e2453f9b0bfd2889dd6ee3f *html/colorGraphNodes.html
ee84a31ea99c03e36c776efc4eb80cb0 *html/combineNodes.html
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90457550676baed59d8a6b8a5d21254c *html/diffGraphs.html
eec02141c8529f20065ca01a7f877936 *html/downloadBiopaxData.html
db4dde0a2b3fd37cfb077d5e4bedd8ea *html/generateNewUniqueID.html
5bc41c0190d4f59bf731a01f1a8ec191 *html/getClassProperties.html
8bbb15c0f434cab098a20103bd812a9b *html/getInstanceClass.html
002d6b0bffa51d53f8a276de787b78fe *html/getInstanceProperty.html
0df24ac73340c2a3b20a4f418a8955c2 *html/getNeighborhood.html
557e978ce786133a723c04c0fa4c25f9 *html/getParticipants.html
1ccdc6ffa576b7e03f22ce995895b152 *html/getReferencedIDs.html
772fd2c272e175b11bb9778e1af7b095 *html/getReferencingIDs.html
3945230c455594b5442a26b57d3dd08c *html/getSubClasses.html
ac6735d940f79a8fee5a6a7ce895c261 *html/getSuperClasses.html
b8c19fcd43fe4a509390271e955a159c *html/getXrefAnnotations.html
a85891e874e6d7d9230dc3c23d9abadd *html/hasProperty.html
4362256a2d212af8f496213e111e4fda *html/internal_NrOfXMLNodes.html
2b2741c284023565fe20f7d5ff43459b *html/internal_XMLInstance2DF.html
1f09a8a78d2d377326d19cfd3a1dded8 *html/internal_checkArguments.html
81d1be282afebba011c2954aa4b11a53 *html/internal_generateXMLfromBiopax.html
f49f7d96c91381d72ef22094545920ca *html/internal_getBiopaxModelAsDataFrame.html
72d018aa0009d242518212ea72b76595 *html/internal_propertyListToDF.html
37abc024207ad0ba621df41c8a11fbe6 *html/internal_resolvePhysicalEntityParticipant.html
87b23e71a040feb17be98368052c9817 *html/intersectGraphs.html
f7aba01df8797229bac7a438ddf0209b *html/isOfClass.html
233ebc2a90f63e7846efa1f445209ea9 *html/isOfNamespace.html
735553153a8fb48e2eba9b6436886439 *html/isURL.html
eda41870c2f3122c758b57d62cb7564e *html/layoutRegulatoryGraph.html
951ea0939dfe4ea44828c01f426e5b99 *html/listComplexComponents.html
33f8170ad637cc9084ddc8bdb8a096c2 *html/listInstances.html
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49fc08fb992157b065cbc271afbf9a56 *html/listPathwayComponents.html
820ba16fab8cfbc221fd6bedcb647000 *html/listPathways.html
1d5fdaca8b7416251f5cf902ed6fe20b *html/mergePathways.html
ae7e62098808695d2f166d5a983ff34b *html/pathway2AdjacancyMatrix.html
aa4d41204fdc5433054f0e75f5a97c60 *html/pathway2Geneset.html
99f9846aca82066e7c80aa32229fc8a4 *html/pathway2Graph.html
b7e7bca06b8cdfd54497879b96525731 *html/pathway2RegulatoryGraph.html
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2224c75d4f99fb59185776c0d2823a07 *html/print.biopax.html
662979c50805e7f131fd16f4451226dc *html/rBiopaxParser-package.html
95f7ffb3f0ca69704a1dbe6127b8b76d *html/readBiopax.html
cc73cf5227b7a4a6867af54a05526b2e *html/removeDisconnectedParts.html
a639aec596fd9644355448876a13412d *html/removeInstance.html
f54d686e43e7ebf6f9fada18b716090e *html/removeNodes.html
5a432bdebb5f5148d5aada7ae22c3322 *html/removeProperties.html
697a010b13795005a2c2dc635ba1c89b *html/selectInstances.html
62075bef2e391b83484ef632320c5f14 *html/splitComplex.html
3df13efb8685a842bd71b38715ecae74 *html/striphash.html
8350adce5c25544703c6298bde91fc13 *html/stripns.html
4f29df3b76afe3fd1b28a0c39c858fd0 *html/transitiveClosure.html
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b5975a82735883058d9a4e5b29b97c2c *html/unfactorize.html
a53c145078c1900057fb75d34d9f18ac *html/uniteGraphs.html
6ddb2052201d4dec78cb8dd4c6309a46 *html/writeBiopax.html
9557d3501e1f91229ccc5872088b192c *unitTests/test_biopax2Classes.R
ca24da47dabac88d04f0321c80284c69 *unitTests/test_downloadBiopaxData.R
98e65fb4ec6db14354f8dc92ea1013cc *unitTests/test_helperFunctions.R
