b978dd7ef8617b51972cd47006cebd2c *CITATION
62575a7b46cd1356929454eef8429581 *DESCRIPTION
81c66aa8111d8ab9c1426ed9961f3e3b *INDEX
b7486c795c499b03ea6b64d0ebda9c85 *Meta/Rd.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
bfe291fcd5434d168107348074b30618 *Meta/hsearch.rds
5b0d3a2696104d245d0ae6a72841dac3 *Meta/links.rds
2d27ce03dcac52f5cfb7b314fa3db75d *Meta/nsInfo.rds
5971aa117854a6eb739d2988ba13058f *Meta/package.rds
bc906afd356592e8b47ff16f41d9a913 *Meta/vignette.rds
ee5e13c6344dd81e1ae6ae2e5c21aaa8 *NAMESPACE
3fdcdc83f41a05d57b850231e2e1ab49 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/pram
eeb8477beb0a904eaba7cb916a2708c3 *R/pram.rdb
295d5441e96ed7b6122fb71319030ca9 *R/pram.rdx
9e58ad003138d1c66a70d0d10db3d418 *doc/index.html
0369c0ebe341acf07e9ff1254719aebe *doc/pram.R
a4e2076d4e1656856bc8f3c1da25efc5 *doc/pram.Rmd
12b9f64078326fe3bc04231bc58ff798 *doc/pram.pdf
6bc8dfb54b9e62665f41741b2609367c *extdata/bam/CMPRep1.sortedByCoord.clean.bam
3c00bc5d9e5b4e0f16b1f0a1821d63d7 *extdata/bam/CMPRep1.sortedByCoord.clean.chr10.plus.bam
cd18f07d323eec235e4f443244268ec9 *extdata/bam/CMPRep1.sortedByCoord.clean.chr12.minus.bam
ddf08b29acc438c11554daf480bf1699 *extdata/bam/CMPRep1.sortedByCoord.raw.bam
aca49d6b6a2ffd81f81b2f56d0b40e02 *extdata/bam/CMPRep2.sortedByCoord.clean.bam
ab783a9429dbd68054ab1e202589d6f6 *extdata/bam/CMPRep2.sortedByCoord.raw.bam
c72525196731ba5c7a453634e02c245e *extdata/benchmark/plcf.tsv
0dc29665caca31ba0542276d3b7609c0 *extdata/benchmark/tgt.tsv
312a28fd4191383057964266227d6622 *extdata/chromsize/hg19.tsv.gz
0ec9c7b98e125033f6b712211c82e71e *extdata/chromsize/hg38.tsv.gz
7a546ec366f0387ef4d6da49fec1b6d1 *extdata/chromsize/mm10.tsv.gz
bcfe201a8da1b4b4dd7e69d6962d82fc *extdata/chromsize/mm9.tsv.gz
c91b4bd76f65ff4982a7c32187a194de *extdata/demo/SZP.bam
2bff64cd1a98e2a008a3a05aa3fa54e0 *extdata/demo/TLC.bam
c8ff38a72ebd56b20e9b954a12f6800e *extdata/demo/in.gtf
88418451ac78fa3dd45bf4bd49a8f5e5 *extdata/gtf/defIgRanges_in.gtf
162b125396864c90049ee15a5fca22a6 *extdata/gtf/gnc_v24_minus_chr18.gtf
a7cc0cbac78919adb1e6fcb74f8e6ee1 *extdata/gtf/ig_mm10_chr12.gtf
a3b6aa1d02a8bb0f7997d6607c45caf3 *extdata/gtf/selModel_in.gtf
0624089e8191beec85a3ce578e059b08 *extdata/gtf/selModel_out.gtf
e88e53a580084e44f21144a99e466015 *extdata/vignettes/pram.pdf
b97f7004555545b4e69a075419d407b2 *help/AnIndex
ebfe6a22bb80a80ec2383a5008087971 *help/aliases.rds
84880c76fcfcc0edc104d07746ea035f *help/paths.rds
df1b554cd7c8c10f7aab94e9097aa956 *help/pram.rdb
20b3c2ea2f5a4ad5a959d115d7b11ef8 *help/pram.rdx
1b856927e04507eee5ec28974042f8d9 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
c1ea161167584e917b63959c2af2c37d *html/buildModel.html
b3ea09233d32e219652b8881eee3d925 *html/defIgRanges.html
8e587f53ed4bf2419daa133cbe16f778 *html/evalModel.html
33c4dc2e85177cff536df4b6cfc1c8cd *html/prepIgBam.html
0c07800af2f08e8f7ccf7e60ba19d5f0 *html/runPRAM.html
6cdb4b17005f8ad7366a538a10b99263 *html/selModel.html
