peakPantheR {peakPantheR} | R Documentation

## peakPantheR: A package for Peak Picking and ANnoTation of High resolution Experiments

### Description

peakPantheR detects, integrates and reports pre-defined features in mass spectrometry data files. It enables the real time annotation of multiple compounds in a single file, or the parallel annotation of multiple compounds in multiple files.

### Details

The main functions of peakPantheR are `peakPantheR_singleFileSearch` for realtime annotation, and `peakPantheR_parallelAnnotation` for parallel annotation. The `peakPantheRAnnotation` object stores parallel annotation results, while reporting functions help assess and the quality of annotation and update fitting parameters. Refer to the vignettes for graphical user interface and command line tutorials.

### Author(s)

Maintainer: Arnaud Wolfer adwolfer@gmail.com (0000-0001-5856-3218)

Other contributors:

- Goncalo Correia gscorreia89@gmail.com (0000-0001-8271-9294) [contributor]

- Jake Pearce jake.pearce@gmail.com [contributor]

- Caroline Sands caz119@hotmail.co.uk [contributor]

### See Also

Useful links:

- https://github.com/phenomecentre/peakPantheR

- Report bugs at https://github.com/phenomecentre/peakPantheR/issues/new

[Package peakPantheR version 1.0.0 Index]