integrateBiopax {paxtoolsr} | R Documentation

## Integrate two BioPAX OWL files (DEPRECATED)

### Description

This function merges two BioPAX OWL files

### Usage

    integrateBiopax(inputFile1, inputFile2, outputFile = NULL)

### Arguments

`inputFile1` | a string of the name of the input BioPAX OWL file
`inputFile2` | a string of the name of the input BioPAX OWL file
`outputFile` | a string of the name of the output integrated BioPAX OWL file

### Details

This method is deprecated. Use mergeBiopax instead.

### Value

an XMLInternalDocument representing a BioPAX OWL file

### See Also

`mergeBiopax`

### Examples

    outFile <- tempfile()
    results <- integrateBiopax(system.file("extdata", "raf_map_kinase_cascade_reactome.owl",
      package="paxtoolsr"),
      system.file("extdata", "dna_replication.owl", package="paxtoolsr"),
      outFile)

[Package paxtoolsr version 1.20.0 Index]