plotIntegration {omicRexposome} | R Documentation

## Function to draw de result of an integration study

### Description

This function draws a plots for the ResultSet from integration function

### Usage

    plotIntegration(object, cmpX = 1, cmpY = 2, lb.th = 0.2,
      legend.show = TRUE, colors, ...)

    ## S4 method for signature 'ResultSet'
    plotIntegration(object, cmpX = 1, cmpY = 2,
      lb.th = 0.2, legend.show = TRUE, colors, ...)

### Arguments

`object` | An object of class ResultSet obtained from crossomics.
`cmpX` | (default `1`) Value of the X-axis when ploting rsults from mcia.
`cmpY` | (default `2`) Value of the Y-axis when ploting rsults from mcia.
`lb.th` | (default `0.20`) Threshold to place labels on radar chart drawn when ploting results from MultiCCA.
`legend.show` | (default `TRUE`) If set to FALSE, right legend of radar plot is hidden when ploting results from MultiCCA.
`colors` | (optional) Names vector with the colors sued to draw each dataset. Used when ploting results from MultiCCA. If missing, random colores are chosen.
`...` | Optional arguments are given to `plot` from omicade4 pacage (argument `axes` is filled with values from `cmpX` and `cmpY`).

### Value

A ggplot2 object

### See Also

`plotAssociation` for plotting association results. `crossomics` to create a `ResultSet` to be passed to this function.

### Examples

    data("crs", package = "omicRexposome")
    plotIntegration(crs)

[Package omicRexposome version 1.8.0 Index]