estimateDispersionsForCellDataSet {monocle} | R Documentation

## Helper function to estimate dispersions

### Description

Helper function to estimate dispersions

### Usage

    estimateDispersionsForCellDataSet(cds, modelFormulaStr, relative_expr,
      min_cells_detected, removeOutliers, verbose = FALSE)

### Arguments

`cds` | a CellDataSet that contains all cells user wants evaluated
`modelFormulaStr` | a formula string specifying the model to fit for the genes.
`relative_expr` | Whether to transform expression into relative values
`min_cells_detected` | Only include genes detected above lowerDetectionLimit in at least this many cells in the dispersion calculation
`removeOutliers` | a boolean it determines whether or not outliers from the data should be removed
`verbose` | Whether to show detailed running information.

[Package monocle version 2.14.0 Index]