fitacc {mnem} | R Documentation

## Simulation accuracy.

### Description

Computes the accuracy of the fit between simulated and inferred mixture.

### Usage

    fitacc(x, y, strict = FALSE, unique = TRUE, type = "ham")

### Arguments

`x` | mnem object
`y` | simulation object or another mnem object
`strict` | if TRUE, accounts for over/underfitting, i.e. the number of components
`unique` | if TRUE, phis of x and y are made unique each (FALSE if strict is TRUE)
`type` | type of accuracy. "ham" for hamming, "sens" for sensitivity and "spec for Specificity"

### Value

plot of EM convergence

### Author(s)

Martin Pirkl

### Examples

    sim <- simData(Sgenes = 3, Egenes = 2, Nems = 2, mw = c(0.4,0.6))
    data <- (sim$data - 0.5)/0.5
    data <- data + rnorm(length(data), 0, 1)
    result <- mnem(data, k = 2, starts = 1)
    fitacc(result, sim)
    fitacc(result, sim, type = "sens")
    fitacc(result, sim, type = "spec")
    fitacc(result, sim, strict = TRUE, type = "sens")
    fitacc(result, sim, strict = TRUE, type = "spec")

[Package mnem version 1.2.0 Index]