makeMethylDB {methylKit} | R Documentation

## coerce methylKit objects from memory to flat file database objects

### Description

The function converts in-memory methylKit objects to methylDB objects

### Usage

    makeMethylDB(obj, dbdir = getwd())

    ## S4 method for signature 'methylBase'
    makeMethylDB(obj, dbdir = getwd())

    ## S4 method for signature 'methylRaw'
    makeMethylDB(obj, dbdir = getwd())

    ## S4 method for signature 'methylDiff'
    makeMethylDB(obj, dbdir = getwd())

    ## S4 method for signature 'methylRawList'
    makeMethylDB(obj, dbdir = getwd())

### Arguments

`obj` | an `methylBase`, `methylRaw`, `methylRawList` or an `methylDiff` object
`dbdir` | directory where flat file database(s) should be stored, defaults to getwd(), working directory.

### Value

an `methylBaseDB`,`methylRawDB`, `methylRawListDB` or an `methylDiffDB` object

### Examples

    ## Not run:
    data(methylKit)

    makeMethylDB(methylBase.obj,"my/path")

    ## End(Not run)

[Package methylKit version 1.12.0 Index]