56a830addfa0bdc7d90aaef47813a148 *DESCRIPTION
6b85d553ee0236b2aac591d4f96723d3 *INDEX
808f61a71844be92c264da1a085e5e75 *LICENSE
aa194ff0023bba72a1caa5a8a82ece14 *Meta/Rd.rds
3589edb1deb58691eecebe3da9f7c193 *Meta/data.rds
989edc50dffd590a54c8c2ab86576cf9 *Meta/features.rds
9ca0b8a7f4f3ab2fc7e98cae2c2092aa *Meta/hsearch.rds
b9e0075bc407b8c8f311234199e7d120 *Meta/links.rds
cea87839f2cfd0a1160f22f0e0b9e281 *Meta/nsInfo.rds
976227e35cd30964c1961db0bf332195 *Meta/package.rds
45d7bb93d4331f1534279177dd6d76c6 *Meta/vignette.rds
0a8577d62de4a7403e050d96ad9d1c8b *NAMESPACE
1ea5a08f397bffb5eda19f7283b09982 *NEWS.md
ebf0fc819595d631b8bf280c4b049940 *R/methrix
ee487ef52c1efc6528b9adc6e3405515 *R/methrix.rdb
2a4ecd6c1d3592725aee40b766136a80 *R/methrix.rdx
dc14f08c4dd75997a7ee0cdaa13b5c01 *data/methrix_data.rda
430d3b114006bb1d03bd6a410e855b1d *doc/index.html
56f4044cbad79fded2160f85979f658d *doc/methrix.R
22b6d9b9bb84f1879feef7f317db24dd *doc/methrix.Rmd
8ae9e49830b2115e049cbc574ba1d7ce *doc/methrix.html
439353455f9ced3ce8e4cd278c047b7f *extdata/C1.bedGraph.gz
16c9096dc581e0556bc39a9e77c5aba1 *extdata/C2.bedGraph.gz
bf323916462c9d03e9b1b55b40e1ac1c *extdata/N1.bedGraph.gz
0c0d0c328b8d2159121fff860952cb81 *extdata/N2.bedGraph.gz
10cfdfad3c8247907a6077d0ac14115b *extdata/bdg2bw.sh
93f30492219babe2803f7365bec48c0c *help/AnIndex
2837e4cfa4eb910f93ef5f40abe3c5a8 *help/aliases.rds
419f2aeac00eedaecd89fbdd2cca673e *help/methrix.rdb
5f299521b39d6d505fc15311bb9c52b1 *help/methrix.rdx
1e27d0618c20b062a50276a78a127f13 *help/paths.rds
6f0e195e615995c45bae0b0da25d8261 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
7b0d71eb528e1ff8d102e52c6e7f7c6e *html/combine_methrix.html
fad5baa6d7bbbc032aac0d7ec324a0c6 *html/convert_HDF5_methrix.html
9ddd202b4cba1bc108c95fef611c59c0 *html/convert_methrix.html
680b67f06230f5c5ec234422eea10b43 *html/coverage_filter.html
cfa0c3f44d29843a96a9d6c7926b5d67 *html/extract_CPGs.html
9f7c15b321ffcd3af2296b527f0975b2 *html/get_matrix.html
cf5f989b651af193226729e017d8e670 *html/get_region_summary.html
e1e8ea5ee05669e03da37302de16ba96 *html/get_stats.html
509950ef48245f7ea666605c4984e03d *html/load_HDF5_methrix.html
674812d016554d4a407f05c9b2be82cf *html/mask_methrix.html
352f049218554e1e7f2fd38be8252f37 *html/methrix-class.html
81b25d9252b456c042a5caa0a6b8766d *html/methrix2bsseq.html
946c4f2a30c79e61303b2fbb17adee05 *html/methrix_data.html
df0e4ef238bc721207db264b10a439b3 *html/methrix_pca.html
bee1a8daed66ecf3a8513b77ed7939c3 *html/methrix_report.html
c66faff42f4f2cf9edab1fd98e4b490f *html/order_by_sd.html
8d3eb8860f40f86fe971332badd85efe *html/plot_coverage.html
2f8a4e7e13886ede54ec008661d2a525 *html/plot_density.html
51cbfe64d14c63bcb03be5dfeb5262bf *html/plot_pca.html
85b8787a1f6506f81c7c05de6961c12f *html/plot_stats.html
4abf5d81f310f2d440b06a476801862c *html/plot_violin.html
62ea99be00fbdea68d72acd9974d6c91 *html/read_bedgraphs.html
36719575c7e7774eb9d24cd853a4efdc *html/region_filter.html
c83ed0ff769f3be648c3a712f4db513d *html/remove_snps.html
37e61bd57387516dc7a3e119d343a0c4 *html/remove_uncovered.html
5f9098c0fa675d11f14cf8d044a4a873 *html/save_HDF5_methrix.html
6231cdca3acd6f27a1dd1b4a1c13e0e8 *html/subset_methrix.html
b82fb2f4e940b41a7d74701d495f61bc *html/write_bedgraphs.html
b95a6f651ca34753828a67ee11278a86 *report/custom.css
2ea0e6169daa9f2e96bc68f18325f82b *report/logo_large_hexagon.gif
59212e04cee3503b9a1604952145a419 *report/summarize_methrix.Rmd
4f0a98608818d7d6524c1a36ba684128 *script/data_generation.R
