generics.immunoclust {immunoClust} | R Documentation

## Generic function definitions in immunoClust

### Description

Collection of generic function definitions used in immunoClust either for an `immunoClust` or an `immunoMeta` object.

### Usage

    nobs(object, ...)

    npar(object, ...)

    ncls(object, ...)

    weights(object, ...)

    mu(object, ...)

    sigma(object, ...)

    label(object, ...)

    subset(x, ...)

    parameters(object, ...)

    transformParams(object, ...)

### Arguments

`object, x` | an object to apply the function.
`...` | addionional options to be passed tomethods

### Value

The appropriate value for the specific cal (see dection Details).

### Details

nobs

  already generic in `stats`. Here, returns the number of clustered objects either cell-events or cell-clusters in cell event or meta clustering.

npar

  returns the number of parameters used for clustering.

ncls

  returns the number of cluster, either cell-event cluster or meta-cluster.

weights

  already generic in `stats`. Here, returns the weights of the mixture models for the cell-event of meta-clustering.

mu

  returns the cluster means.

sigma

  already generic in `stats`. Here, returns the co-variance matrices of the clusters.

label

  returns the cluster label, i.e. the assignment of the clustered objects to the clusters.

events

  returns the number of cell-events for the clusters.

subset

  alreay generic in `stats`. Here, returns an object with mixture model on a subset of parameters.

parameters

  already generic in `flowCore`. Here, lists the parameters used for clustering.

transformParam

  return an object with transformed mixture model parameters.

### Author(s)

Till Sörensen till-antoni.soerensen@charite.de

### See Also

`immunoClust`, `immunoMeta`

[Package immunoClust version 1.18.1 Index]