rowDataPlotDefaults {iSEE} | R Documentation

## Row data plot defaults

### Description

Create default settings for row data plot panels in the iSEE interface.

### Usage

    rowDataPlotDefaults(se, number)

### Arguments

`se` | A SummarizedExperiment object.
`number` | An integer scalar, specifying the maximum number of row data plots that can be added to the interface.

### Details

Parameters available to row data plots are:

`YAxis`:

  Character, which column of `rowData(se)` should be shown on the y-axis? Defaults to the first entry of `colData(se)`.

`XAxis`:

  Character, what variable should be shown on the x-axis? Defaults to `"None"`, but can also be `"Row data"` or `"Feature name"`.

`XAxisRowData`:

  Character, which column of `rowData(se)` should be shown on the x-axis if `XAxis="Row data"`? Defaults to the first entry of `rowData(se)`.

All row-based parameters described in `?"iSEE point parameters"` are applicable. All plot-based parameters described in `?"iSEE selection parameters"` are applicable.

### Value

A DataFrame containing default settings for parameters of each of `number` row data panels.

### Author(s)

Aaron Lun

### See Also

`?"iSEE point parameters"`, `?"iSEE selection parameters"`

### Examples

    example(SingleCellExperiment, echo=FALSE) # mock up 'sce'.
    rowDataPlotDefaults(sce, n=1)

[Package iSEE version 1.6.1 Index]