iSEE-pkg {iSEE} | R Documentation

## iSEE: interactive SummarizedExperiment/SingleCellExperiment Explorer

### Description

`iSEE` is a Bioconductor package that provides an interactive Shiny-based graphical user interface for exploring data stored in `SummarizedExperiment` objects, including row- and column-level metadata. Particular attention is given to single-cell data in a `SingleCellExperiment` object with visualization of dimensionality reduction results, e.g., from principal components analysis (PCA) or t-distributed stochastic neighbour embedding (t-SNE)

### Author(s)

Aaron Lun infinite.monkeys.with.keyboards@gmail.com

Charlotte Soneson charlotte.soneson@uzh.ch

Federico Marini marinif@uni-mainz.de

Kevin Rue-Albrecht kevin.rue-albrecht@kennedy.ox.ac.uk

[Package iSEE version 1.6.1 Index]