path_vals {hipathia} | R Documentation

## Pathways matrix of the BRCA gene expression dataset

### Description

Matrix of pathway activation values for the BRCA dataset. This matrix is extracted from the Results object returned by the `hipathia` function by means of the `get_paths_matrix` function.

### Usage

    data(path_vals)

### Format

Matrix with 40 columns and 1868 rows. Row names are Pathway IDs and column names are the TCGA identifyers of the samples.

### Details

`path_vals <- get_paths_matrix(results)`

### Value

Matrix with 40 columns and 1868 rows. Row names are Pathway IDs and column names are the TCGA identifyers of the samples.

[Package hipathia version 2.2.1 Index]