gprege-package {gprege} | R Documentation

## gprege - Gaussian Process Ranking and Estimation of Gene Expression.

### Description

This package implements the method of Kalaitzis and Lawrence (2011) for Gaussian process modelling gene expression time-series data. The method can be used to filter quiet genes and quantify differential expression in time-series expression ratios.

### Details

Package: | gprege
Type: | Package
Version: | 0.99.0
Date: | 2011-07-08
License: | A-GPL Version 3

For details of using the package please refer to the Vignette.

### Author(s)

Alfredo Kalaitzis

Maintainer: Alfredo Kalaitzis <alkalait@gmail.com>

### References

A.~A.~Kalaitzis and N.~D.~Lawrence. A Simple Approach to Ranking Differentially Expressed Gene Expression Time Courses through Gaussian Process Regression BMC Bioinformatics 2011, 12:180. DOI:10.1186/1471-2105-12-180.

### See Also

`demGpCov2D, demGpSample, demInterpolation, demOptimiseGp, demRegression`

### Examples

    ## see demTp63Gp1.R

[Package gprege version 1.30.0 Index]