getFlowFrame {ggcyto} | R Documentation

## extract flowFrame data structure from the given R object

### Description

Mainly to get the channel and marker information.

### Usage

    getFlowFrame(x)

    ## S3 method for class 'flowSet'
    getFlowFrame(x)

    ## S3 method for class 'ncdfFlowList'
    getFlowFrame(x)

    ## S3 method for class 'GatingSetList'
    getFlowFrame(x)

    ## S3 method for class 'GatingSet'
    getFlowFrame(x)

    ## S3 method for class 'GatingHierarchy'
    getFlowFrame(x)

### Arguments

`x` | flowSet or GatingSet/GatingHierarchy

### Value

a flowFrame. When x is a ncdfFlowSet or GatingSet that is associated with ncdfFlowSet, the raw event data is not read and an empty flowFrame is returned.

### Examples

    data(GvHD)
    fs <- GvHD[1:2]
    getFlowFrame(fs)# fs is a flowSet

    dataDir <- system.file("extdata",package="flowWorkspaceData")
    gs <- load_gs(list.files(dataDir, pattern = "gs_manual",full = TRUE))
    getFlowFrame(gs)# gs is a GatingSet

[Package ggcyto version 1.14.1 Index]