plot3D {flowSpy} | R Documentation

## Visualization of 3D data of FSPY

### Description

Visualization of 3D data of FSPY

### Usage

    plot3D(
      object,
      item.use = c("PC1", "PC2", "PC3"),
      color.by = "stage",
      order.by = NULL,
      size = 1,
      angle = 60,
      scale.y = 0.8,
      category = "categorical",
      main = "3D plot of FSPY",
      color.theme = NULL,
      ...
    )

### Arguments

`object` | An FSPY object
`item.use` | character. Items use to 3D plot, axes x and y and z must be numeric.
`color.by` | character. Dot or mesh color by which character. It can be one of the column of plot.meta, or it can be just "density" (the default value).
`order.by` | character. Order of color theme.
`size` | numeric. size of the dot
`angle` | numberic. angle of the plot
`scale.y` | numeric. scale of y axis related to x- and z axis
`category` | character. numeric or categorical
`main` | character. title of the plot
`color.theme` | vector. Color themes use in the plot.
`...` | options to pass on to the `scatterplot3d` function.

### Value

gplots figure

### Examples

    if (FALSE) {

     plot3D(fspy, item.use = c("DC_2","DC_1","DC_3"), color.by = "stage",
            size = 0.5, angle = 60, color.theme = c("#FF99FF","#7A06A0","#FF3222"))

    }

[Package flowSpy version 1.0.4 Index]