readCytosploreFCS {cytofast} | R Documentation

## Read .fcs files created by cytosplore

### Description

This function reads and combines .FCS files created specifcally by Cytosplore.

### Usage

    readCytosploreFCS(dir = NULL, colNames = c("names", "description"))

### Arguments

`dir` | directory containing the .FCS files created by Cytosplore
`colNames` | character string that specifies which label should be used as the column names. This could be the name of the markers 'names' or the description for the markers 'description'.

### Value

The function returns an object of class `data.frame`. It includes both `clusterID` and `sampleID` as variables.

### Note

This function is a wrapper around `read.FCS`. For more flexibility see their help page.

### Examples

    dirFCS <- system.file("extdata", package="cytofast")
    cfData <- readCytosploreFCS(dir = dirFCS, colNames = "description")

[Package cytofast version 1.2.0 Index]