get_classes-ConsensusPartition-method {cola} | R Documentation

## Get class IDs from the ConsensusPartition object

### Description

Get class IDs from the ConsensusPartition object

### Usage

    ## S4 method for signature 'ConsensusPartition'
    get_classes(object, k = object@k)

### Arguments

`object` | A `ConsensusPartition-class` object.
`k` | Number of partitions.

### Value

A data frame with class IDs and other columns which are entropy of the percent membership matrix and the silhouette scores which measure the stability of a sample to stay in its group.

If `k` is not specified, it returns a data frame with class IDs from every k.

### Author(s)

Zuguang Gu <z.gu@dkfz.de>

### Examples

    data(cola_rl)
    obj = cola_rl["sd", "kmeans"]
    get_classes(obj, k = 2)
    get_classes(obj)

[Package cola version 1.2.1 Index]