bg3 {chroGPS} | R Documentation

## Sample binding site and related data from BG3 cell line in Drosophila melanogaster.

### Description

chroGPS example dataset including ChIP-CHIP (modEncode) and ChIP-Seq (NCBI GEO GSE19325) data for Drosophila melanogaster BG3 cell line. The object `toydists` stores precomputed `distGPS` objects (called `d, d2, d3`) for the epigenetic factors used in the dynamic vignette that comes with the package.

### Usage

    data(bg3)

### Source

`http://www.modencode.org` `http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE19325`

### References

`http://www.modencode.org` `http://www.ncbi.nlm.nih.gov/geo/`

### See Also

`s2` for the analog S2 cell line object. `toydists` for precomputed distance matrixes.

### Examples

    data(bg3)
    class(bg3)
    bg3
    bg3names$Factor
    # See vignette examples for several uses of these datasets.

[Package chroGPS version 2.4.0 Index]