8edff983a2c544ed9296cb8dce606469 *DESCRIPTION
1b1474442473c4d14baa6acf93cfdba6 *INDEX
25e7e2bd0c642c6e9406ea1392eae435 *Meta/Rd.rds
012cfa92cb8d25cb9708a27ab6d96d6e *Meta/data.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
fae9496dbe15ce8f2d5a06b7383a3f16 *Meta/hsearch.rds
ce51444a5e820b89f873454787892186 *Meta/links.rds
7a9253a5d7e34cec21f5ae9517672b74 *Meta/nsInfo.rds
f1c02960502b11c33cfdc94f3a58fdf5 *Meta/package.rds
a762e36512adea6647cacbfe77c206ec *Meta/vignette.rds
8406fd1414247da7405904c2546ad3c6 *NAMESPACE
ebf0fc819595d631b8bf280c4b049940 *R/chipseq
41c31a2d8f689a6d857add25b0cceeca *R/chipseq.rdb
d3ed92a010f2646d3e4ee7c9f6db5e66 *R/chipseq.rdx
c67ac49dbe2a5c389a1b642feed5cbc9 *Scripts/AntibodyComparison.Rnw
630a273418c2f9ea72fc5134e7ec70dd *Scripts/CTCFBindingSites.R
ca9cf8135dd0e90c84a79c7d25b67f8e *Scripts/CTCF_ERV.R
aee97330bc6fc5325ce931bed2ce78db *Scripts/CopyNumber.Rnw
b9fdf9ddd9d25837d91b84181d44a947 *Scripts/Islands.Rnw
d3e0e7d6d67905e3f34b7b3115d6729a *Scripts/MyoD.R
70ed9c49dec4afdb22fde785402b70ba *Scripts/PairedEndComparison.Rnw
dcb4e37001f03145920d1c8ff3117e0f *Scripts/PeakContextHuman.Rnw
e22d7dbd060325161369d0e7e2e58809 *Scripts/PeakContextMouse.Rnw
bf012dbfcfee1aee1d476b131ff815b6 *Scripts/PeakCutoff.Rnw
027314cba8b874dc1d337a24048faf6a *Scripts/PeakModel.Rnw
10a39afb911fbcfd768ce3f473074e6e *Scripts/PeakReproducibility.Rnw
fc5f8df77609407d4dde159745ead9de *Scripts/PeaksByCopyNumber.Rnw
727166198a38cc8d25d326ca1eb40ec4 *Scripts/RateComparison.Rnw
aa70f1fa6f051112a2d02f42a95ce676 *Scripts/ReadAndSave54.R
ae7894a5b856dbaf4eb47efb18a37aaa *Scripts/ReadAndSaveCTCF.R
42e617263ffdc34e7ca72e2812520574 *Scripts/ReadAndSaveData.R
05caa000363574dcdbb4f33f43adc444 *Scripts/ReadAndSaveSimulation.R
0499bfe7ca2da5b930300dcea653fe3f *Scripts/SolexaSim.R
8418412635db910c56247de35566e5e9 *Scripts/abc.rda
b2b3308f0d60517c9e1d4d10aadc2ac9 *Scripts/antibody_comparison.R
ed4f51f8bcebaf4eeeb5c96ff4879c24 *Scripts/dePeaks.R
f7d49434a22023a99f7926fb6ee4f6e6 *Scripts/diffpeak.R
3ed9c551e8103a45b28b99eb559a484f *Scripts/diffpeaks.R
837228bc953727b032e40cbb6205a57d *Scripts/estimate_fragment_size.R
a06c7dabaad7ed64c565327650ca8cc9 *Scripts/fibroblasts.R
e72faaaedf165cab4014877a5c052884 *Scripts/getIsochores.R
3783000fdd3bf5e218849c3c4f13125f *Scripts/hmm.R
4b7c58b557ccce7b42ccc011b4d82021 *Scripts/human-islands.R
eeaf2ff4f62313033a80205dee813c86 *Scripts/isochore_comparison.R
f7328263dd15bd2151f28b1608cbbb49 *Scripts/isochores.mm9.rda
c7a667f5161cfde7f01daaa6d4caa464 *Scripts/negbinomial.R
a2ca467d2433f490d5cc6b1343690bb2 *Scripts/peakContext.R
786298cc4d4d8d7fba7ac8a3cdf3bdc5 *Scripts/peak_mle.R
e14f736999fe4d70f015fb4d4e39ba68 *Scripts/poisson.R
2d307d1468ebac6eea2f052f07bb4e30 *Scripts/simulate.R
bf32b8fbb5ae9f6aca83195bf78deae3 *Scripts/singletons.Rnw
41c6ab6fd784ed7445193929413afc97 *Scripts/solexa54.R
601e7f10d36f8c8da2d856f410aef879 *data/cstest.rda
ecf5bb4234b028fcab1fdb3c88b52ab0 *data/datalist
2427feeb636619e50d1023c80511d998 *doc/Workflow.R
219e82a7af0f2e1d04933c8b87e6166a *doc/Workflow.Rnw
3e3e47c0bf7d0d8a8b870f809a729515 *doc/Workflow.pdf
32207b13a2f38060064f4cc8b0c8c442 *doc/index.html
7d4b71aca2e2ed20799a1338b54b87bb *help/AnIndex
75bd9851dc4cb626911e8982f625192d *help/aliases.rds
efc0ee3a7ae3ce6d61d1d5a6a22c9984 *help/chipseq.rdb
ff5c1ce8bdf8eb4dfc6dc88bc31cc7ac *help/chipseq.rdx
b254031ec7dea1e14004a549dd392ff1 *help/paths.rds
7cfa9f80865d3bac04a6000055611b9e *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
f847df5f578c071788ce41cc29179bb3 *html/chipseqFilter.html
358513e3169da593a42bb930b437e65f *html/coverageplot.html
e1d09315eaa6c8b648c0210b72921960 *html/cstest.html
6ab9f4cd08ea19a73b29a808c85ba258 *html/diffPeakSummary.html
2ad2434969c36a652e7dfc17cc111bfd *html/estimate.mean.fraglen.html
2aad83232b4cd4b6ab52ecbed03e7d96 *html/islandDepthPlot.html
589abcfc7e12c43c8ba572abbb419bc0 *html/laneSubsample.html
c64ad8f675e6a2a3d3b9528dfb00f19a *html/peakCutoff.html
f19da922561bd67dcff8f61455050946 *html/peakSummary-methods.html
fce7ef6749ee76908169a58bc3d19fa3 *html/subsetSummary.html
b3758a38072ebfa352555a3c4ba03970 *libs/i386/chipseq.dll
8e1532a39217cbeba29c37422ed3dd92 *libs/x64/chipseq.dll
