celdaHeatmap {celda} | R Documentation

## Plot celda Heatmap

### Description

Render a stylable heatmap of count data based on celda clustering results.

### Usage

    celdaHeatmap(counts, celdaMod, featureIx, ...)

### Arguments

`counts` | Integer matrix. Rows represent features and columns represent cells. This matrix should be the same as the one used to generate 'celdaMod'.
`celdaMod` | A celdaModel object of class "celda_C", "celda_G", or "celda_CG".
`featureIx` | Integer vector. Select features for display in heatmap. If NULL, no subsetting will be performed. Default NULL.
`...` | Additional parameters.

### Value

list A list containing dendrogram information and the heatmap grob

### Examples

    data(celdaCGSim, celdaCGMod)
    celdaHeatmap(celdaCGSim$counts, celdaCGMod)

[Package celda version 1.2.4 Index]