simulatedSamples-class {casper} | R Documentation

## Class "simulatedSamples"

### Description

`simulatedSamples` stores multiple simulated isoform expression datasets. Each dataset contains the (simulation) true mean expression in each group and residual variance, as well as the estimated expression in each individual sample.

### Objects from the Class

Objects are returned by `simMultSamples`.

### Slots

The class extends a list directly.

.Data

  A list, each element containing a different simulated dataset

### Methods

show

  `signature(object = "simulatedSamples")`: Displays general information about the object.

coef

  `signature(object = "simulatedSamples")`: Returns a matrix with difference between group means (simulation truth) in all simulated datasets

exprs

  `signature(object = "simulatedSamples")`: Returns a list of ExpressionSets containing the estimated expressions in each simulation.

mergeBatches

  `signature(x="ExpressionSet",y="simulatedSamples")`: Combines `x` with each element in `exprs` in `y`, and returns a list. See `help(mergeBatches)` for more details.

"["

  `x[i]` selects a subset of simulations, `x[,j]` a subset of the samples in each simulation

### Author(s)

David Rossell

### See Also

`mergeBatches`

### Examples

    showClass("simulatedSamples")

[Package casper version 2.20.0 Index]