# The BRENDA Enzyme Database

## Documentation for package ‘brendaDb’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

brendaDb-package | brendaDb: the BRENDA enzyme database.
BiocycPathwayEnzymes | Get all EC numbers involved in a BioCyc pathway.
BiocycPathwayGenes | Get all genes involved in a BioCyc pathway.
brendaDb | brendaDb: the BRENDA enzyme database.
DownloadBrenda | Download and unzip the BRENDA text file.
ExtractField | Extract a specific field from a brenda.entries object.
ID2Enzyme | A helper function for converting names/synonyms to EC numbers.
print.brenda.entries | Show the number of regular and transferred/deleted brenda.entry objects in the brenda.entries list.
print.brenda.entry | Show the non-empty fields in the query result.
QueryBrenda | Query for multiple enzymes.
ReadBrenda | Read BRENDA text file into matrix.
ReadBrendaFile | Read raw BRENDA text file.
SeparateEntries | Convert vector of lines to matrix.
ShowFields | Show all unique BRENDA fields and their corresponding acronyms.