# Generated by roxygen2: do not edit by hand

export(CpGindex)
export(RRBSeq)
export(WGBSage)
export(WGBSeq)
export(atRegions)
export(binCoverage)
export(biscuitMetadata)
export(byChromArm)
export(byExtremality)
export(checkBiscuitBED)
export(condenseSampleNames)
export(extremality)
export(filterLoci)
export(fixAge)
export(fixNAs)
export(getClock)
export(getLogitFracMeth)
export(grToSeg)
export(makeBSseq)
export(readBiscuit)
export(segToGr)
export(simplifySampleNames)
export(summarizeBsSeqOver)
export(unionize)
exportMethods(fixed)
exportMethods(geno)
exportMethods(header)
exportMethods(info)
exportMethods(meta)
exportMethods(samples)
import(BiocGenerics)
import(GenomeInfoDb)
import(GenomicRanges)
import(Homo.sapiens)
import(Mus.musculus)
import(QDNAseq)
import(Rsamtools)
import(S4Vectors)
import(SummarizedExperiment)
import(VariantAnnotation)
import(biscuiteerData)
import(bsseq)
import(dmrseq)
import(gtools)
import(impute)
import(readr)
importFrom(Biobase,featureNames)
importFrom(DelayedMatrixStats,rowCounts)
importFrom(Matrix,Matrix)
importFrom(R.utils,gunzip)
importFrom(VariantAnnotation,meta)
importFrom(VariantAnnotation,scanVcfHeader)
importFrom(data.table,fread)
importFrom(gtools,inv.logit)
importFrom(gtools,logit)
importFrom(matrixStats,rowSums2)
importFrom(methods,as)
importFrom(methods,callNextMethod)
importFrom(methods,is)
importFrom(methods,new)
importFrom(methods,slot)
importFrom(qualV,LCS)
importFrom(rtracklayer,export)
importFrom(utils,data)
importFrom(utils,packageVersion)
importFrom(utils,read.table)
importFrom(utils,write.table)
