plotSMApp {bigPint} | R Documentation

## Plot interactive scatterplot matrices

### Description

Plot interactive scatterplot matrices.

### Usage

    plotSMApp(data = data, xbins = 10)

### Arguments

`data` | DATA FRAME | Read counts
`xbins` | INTEGER | Number of bins partitioning the range of the plot; default 10

### Value

A Shiny application that shows a scatterplot matrix with hexagon bins and allows users to click on hexagon bins to determine how many genes they each contain. The user can download a file that contains the gene IDs that are located in the clicked hexagon bin.

### Examples

    # Example: Create interactive scatterplot matrix for first two treatment
    # groups of data.

    data(soybean_cn_sub)
    soybean_cn_sub <- soybean_cn_sub[,1:7]
    app <- plotSMApp(data=soybean_cn_sub)
    if (interactive()) {
        shiny::runApp(app)
    }

[Package bigPint version 1.2.2 Index]