artmsDataPlots {artMS} | R Documentation

## Individual Normalized abundance dot plots for every protein

### Description

Protein abundance dot plots for each unique uniprot id. It can take a long time

### Usage

    artmsDataPlots(input_file, output_file, verbose = TRUE)

### Arguments

`input_file` | (char) File path and name to the `-normalized.txt` output file from MSstats
`output_file` | (char) Output file (path) name (add the `.pdf` extension)
`verbose` | (logical) `TRUE` (default) shows function messages

### Value

(pdf) file with each individual protein abundance plot for each conditions

### Examples

    artmsDataPlots(input_file = "results/ab-results-mss-normalized.txt",
                   output_file = "results/ab-results-mss-normalized.pdf")

[Package artMS version 1.4.3 Index]