upperGroups {amplican} | R Documentation

## Detect uppercases as ranges object.

### Description

For a given string, detect how many groups of uppercases is inside, where are they, and how long they are.

### Usage

    upperGroups(candidate)

### Arguments

`candidate` | (string) A string with the nucleotide sequence.

### Details

For example: asdkfaAGASDGAsjaeuradAFDSfasfjaeiorAuaoeurasjfasdhfashTTSfajeiasjsf

Has 4 groups of uppercases of length 7, 4, 1 and 3.

### Value

(`IRanges`) A IRanges object with uppercases groups for given candidate string

[Package amplican version 1.8.2 Index]