object {TarSeqQC} | R Documentation

## A set of two amplicon panels example for use the TarSeqQC R package.

### Description

A non-real dataset containing amplicon sequencing results to test the TarSeqQC package, principally the use of the TargetExperimentList class.

### Format

A TargetExperimentList object

### Details

bedFile

  Bed file containing 29 amplicons and 8 genes in 2 PCR pools.

panels

  GRanges obtaining amplicon coverage for two targeted sequencing experiment performed using the same bed file

feature

  Character "amplicon" indicating that the analyzed features are amplicon sequences

attribute

  Character "coverage"

### Author(s)

Gabriela A. Merino gmerino@bdmg.com.ar, Cristobal Fresno cfresno@bdmg.com.ar, Yanina Murua ymurua@leloir.org.ar, Andrea S. Llera allera@leloir.org.ar and Elmer A. Fernandez efernandez@bdmg.com.ar

### Source

see `TargetExperimentList-class`

### See Also

Other TargetExperimentList: `TargetExperimentList-class`, `TargetExperimentList`, `initialize,TargetExperimentList-method`

[Package TarSeqQC version 1.16.0 Index]