tssArrayProperties {TSRchitect} | R Documentation

## tssArrayProperties

### Description

An internal function that calculates various properties for a TSR derived in tsrCluster()

### Usage

    tssArrayProperties(tssArray, seqName, strand)

### Arguments

`tssArray` | an object containing TSS coordinates and their abundances. (data.frame)
`seqName` | the name of the chromosome or scaffold. (character)
`strand` | the strand that the TSR tags are located. (character)

### Value

A vector containing information about the TSR. The returned vector is as follows: seqName (character), TSR start (numeric), TSR end (numeric), strand (character), number of TSSs (numeric), number of tags (numeric), fraction of tags in highest peak (numeric), TSR width (numeric), TSR torque (numeric), Shape Index (numeric), Modified Shape Index (numeric)

[Package TSRchitect version 1.12.4 Index]