makeTFBSmatrix {TFEA.ChIP} | R Documentation

## Function to search for a list of entrez gene IDs.

### Description

Function to search for a list of entrez gene IDs in a TF-gene binding data base.

### Usage

    makeTFBSmatrix(GeneList, id_db, geneSetAsInput = TRUE)

### Arguments

`GeneList` | Array of gene Entrez IDs
`id_db` | TF - gene binding database.
`geneSetAsInput` | TRUE for lists of GeneSet objects, FALSE for lists of vectors.

### Value

1/0 matrix. Each row represents a gene, each column, a ChIP-Seq file.

### Examples

    data('tfbs.database','Entrez.gene.IDs',package = 'TFEA.ChIP')
    makeTFBSmatrix(Entrez.gene.IDs,tfbs.database)

[Package TFEA.ChIP version 1.6.0 Index]