getNETdata {StarBioTrek} | R Documentation

## Get network data from GeneMania.

### Description

getNETdata creates a data frame with network data. Network category can be filtered among: physical interactions, co-localization, genetic interactions and shared protein domain.

### Usage

    getNETdata(network, organismID = NULL)

### Arguments

`network` | variable. The user can use the following parameters based on the network types to be used. PHint for Physical_interactions, COloc for Co-localization, GENint for Genetic_interactions and SHpd for Shared_protein_domains
`organismID` | organism==NULL default value is homo sapiens.

### Value

list with gene-gene (or protein-protein interactions)

### Examples

    ## Not run:
    organismID="Saccharomyces_cerevisiae"
    netw<-getNETdata(network="SHpd",organismID)
    ## End(Not run)

[Package StarBioTrek version 1.12.0 Index]