DSresultGeneTable {SeqGSEA} | R Documentation

## Form a table for DS analysis results at the gene level

### Description

Form a table for differential splicing analysis results at the gene level.

### Usage

    DSresultGeneTable(RCS)

### Arguments

`RCS` | A ReadCountSet object with `DSpermutePval` done.

### Value

A data frame containing each gene's NB-statistics, p-values and adjusted p-values for differential splicing analysis.

### Author(s)

Xi Wang, xi.wang@newcastle.edu.au

### See Also

`DSresultExonTable`, `DSpermutePval`

### Examples

    data(RCS_example, package="SeqGSEA")
    permuteMat <- genpermuteMat(RCS_example, times=10)
    RCS_example <- exonTestability(RCS_example)
    RCS_example <- estiExonNBstat(RCS_example)
    RCS_example <- estiGeneNBstat(RCS_example)
    RCS_example <- DSpermutePval(RCS_example, permuteMat)
    head(DSresultGeneTable(RCS_example))

[Package SeqGSEA version 1.26.0 Index]