predictCandidatesTerminal {SGSeq} | R Documentation

## Identify candidate terminal exons

### Description

Identify candidate terminal exons based on previously identified splice sites and regions with sufficient read coverage.

### Usage

    predictCandidatesTerminal(islands, splicesites, type = c("exon_L", "exon_R"))

### Arguments

`islands` | `IRanges` of genomic regions with minimal read coverage required for internal exon prediction
`splicesites` | `IRanges` of splice sites with metadata columns “type” and “N”
`type` | Character string indicating whether terminal exons should be identified to the left (“exon_L”) or right (“exon_R”) of provided splice sites

### Value

`IRanges` of candidate terminal exons

### Author(s)

Leonard Goldstein

[Package SGSeq version 1.20.0 Index]