aa18330c419d9528c2b511ac7fba1a51 *DESCRIPTION
75f79f358cf2942a34fe245bd5e05d84 *INDEX
c102ca2a08e3bb76c9639fdadfaadefb *Meta/Rd.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
920f5f8fdd42e7742e419110febc7ab5 *Meta/hsearch.rds
a504f09c7f1f4474622e20bbf16e3d8c *Meta/links.rds
4faed3ca03c9ddea646dc7022bdb9405 *Meta/nsInfo.rds
700ea5302e3351c9c01f556751f0ec64 *Meta/package.rds
41c485578d1dd2990c34de15394be501 *Meta/vignette.rds
71a62e7f36be2ff0d390ebe378ca3127 *NAMESPACE
9f84c7fa79f18278f3cf985e2fc70f5d *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/Rariant
49ba674767f6f51a32fbec9f612c2730 *R/Rariant.rdb
642d87af485b74c202da4a0a5ddabe2d *R/Rariant.rdx
1f954c88e562be5c7e1b8c5b00086428 *doc/Rariant-vignette.R
21d1bb29ccc78e94190a37c4548055e7 *doc/Rariant-vignette.Rhtml
f29c09206a6c976f8da82b72659fcf98 *doc/Rariant-vignette.html
2bd3a4f8301e1cdf699dc18063514004 *doc/index.html
b733e19d1d81be53342962a9d7d76e19 *doc/rariant-inspect-ci.png
07a9eb2d281d497bf4bfacf91e382287 *doc/rariant-inspect-shift.png
9f1e0a5b5d9da412072bb5b4b0e051f7 *extdata/platinum/control.bam
e34a7d51112d26ae13d5c7c27a357923 *extdata/platinum/control.bam.bai
ee88a638720cd2ad3178c7c0774dba65 *extdata/platinum/mix.bam
ec0a661ba904c6db6f29eeb2c966c399 *extdata/platinum/mix.bam.bai
34de5dc2e9a41f11b9c900b8cdd32a9e *extdata/platinum/test.bam
e03f8a070ec81bbc16d547fbc10da28a *extdata/platinum/test.bam.bai
d724bf62dd1fd6ffd3b410c8286e924a *extdata/platinum/test2.bam
09fe5af0e31e08ac9e70359d897a2756 *extdata/platinum/test2.bam.bai
910164596e7a38e32d27c1e087497a31 *help/AnIndex
56b115bcf1f4f7c2a4c927cd73200b15 *help/Rariant.rdb
926b3ce8a72bccc67651bbe460c4c744 *help/Rariant.rdx
5cac49ca2666d04bb9aacd416c068189 *help/aliases.rds
648389beb2acc0d9f030b2f86d5f10ea *help/paths.rds
8acbb68707982b048a6cabbac6b18091 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
1308e2f8c6082915e9bff5f23a8d2a44 *html/Rariant-package.html
785b66fff680013a19c2cbee9efb558c *html/ci-adjust.html
3ac4ab564b9ff194d52ae1d227b99636 *html/ci-assessment.html
e09ac325379607c1edee59e99874cb48 *html/ci-utils.html
baa6b969326f16df4c17aee73ce50d46 *html/colorscales.html
bd27d114ec83ec4973dbe269cf159be3 *html/convert-utils.html
5a89b4b92466e67a5be47e860cce6ee6 *html/evidence-heatmap.html
ceaecb7bd4a47759e679603e997b9a32 *html/mismatch-plot.html
cb86562c2a2634843b92b8f18a96f708 *html/mismatch-utils.html
c390727d05078c02eea114ee4158e2f1 *html/multi-utils.html
323d88194b58880d3a38af5a8f9762ed *html/plot-cis.html
2ab5f83c97d69c2be81635d091de5a55 *html/prop-cis.html
4608b99c998ad0e01a08920e247f10cc *html/prop-tests.html
c747a5d0abc8fe708df39c64742ee264 *html/rariant.html
a6dc0cf9e8b52f3b68fe68520025529a *html/shiny.html
81421fabe6fc406628c32f9b1f1941b2 *html/split-sample.html
f9e6f116e131b52b518eff4d5f7f6f0b *html/tally.html
3dee0a815f0f430ad8a294aa9702b404 *html/yesnomaybe.html
d87701476cb8f7ee81123937117ec7f4 *scripts/platinum-sim.sh
78377ea07a23f9b5dd0a44b8426af76a *scripts/rariant
e07c8905cb6fc0a2550ac376bde68922 *tests/test-ci-functions.R
de370811b4b569f8ace26d3ffc6bd0ca *tests/test-rariant-highlevel.R
5e287adb8c151c72c9e061b1fc309e3b *tests/test-rariant-methods-1kg.R
270fba39750a84d4b104aa23def46ecb *tests/test-tally.R
