estNBparamsNoLab {RCM} | R Documentation

## A function to estimate the NB-params ignoring the taxon labels

### Description

A function to estimate the NB-params ignoring the taxon labels

### Usage

    estNBparamsNoLab(design, thetasMat, muMarg, psi, X, nleqslv.control,
      initParam, n, v, dynamic, envRange, preFabMat)

### Arguments

`design` | an n-by-v design matrix
`thetasMat` | A matrix of dispersion parameters
`muMarg` | an offset matrix
`psi` | a scalar, the importance parameter
`X` | the data matrix
`nleqslv.control` | a list of control elements, passed on to nleqslv()
`initParam` | a vector of length v of initial parameter estimates
`n` | an integer, the number of samples
`v` | an integer, the number of parameters per taxon
`dynamic` | a boolean, should response function be determined dynamically? See details
`envRange` | a vector of length 2, giving the range of observed environmental scores
`preFabMat` | a pre-fabricated auxiliary matrix If dynamic is TRUE, quadratic response functions are fitted for every taxon. If the optimum falls outside of the observed range of environmental scores, a linear response function is fitted instead

### Value

a v-by-p matrix of parameters of the response function

[Package RCM version 1.2.0 Index]