NucleosomeTrack {PING} | R Documentation

## Track for the Nucleosome position

### Description

This track actually creates two tracks: it displays the position of the predicted nucleosomes as well as the standard error associated with each prediction and an histogram of the score.

### Usage

    NucleosomeTrack(PS, chr, gen="gen", scoreTrack=TRUE, scoreThreshold=0.05, name="PING", ...)

### Arguments

`PS` | A `data.frame` or `pingList`. The output of `postPING` or `PING`.
`chr` | A character string for the chromosome name.
`gen` | An optional character string for the genome name.
`scoreTrack` | A `logical`. If set to FALSE, the track showing the histogram of the score is removed.
`scoreThreshold` | A `numeric`. Nucleosomes predicted with a score inferior to this threshold are removed.
`name` | A character string for the title of the track.
`...` | A list of supplemental argument that can be provided to the `AnnotationTrack` track constructor.

### Value

This function returns a list containing an object of class `AnnotationTrack` and a `DataTrack` if scoreTrack is set to TRUE.

### Author(s)

Renan Sauteraud

### See Also

`postPING` `plotSummary` `DataTrack` `AnnotationTrack` `plotTracks`

[Package PING version 2.30.0 Index]