RawReadsTrack {PING} | R Documentation

## Raw reads density track

### Description

This track displays the start position of the forward and reverse reads used as input for the segmentation step

### Usage

    RawReadsTrack(ping, reads, chr, gen="gen", from=NULL, to=NULL, ...)

### Arguments

`ping` | A `pingList`. The output of `PING`.
`reads` | An object of class `GRanges`. The reads used in the segmentation process.
`chr` | A character string for the chromosome name.
`gen` | An optional character string for the genome name.
`from, to` | Two `numeric`. A subset of the reads can be selected in order to speed up the computation.

`...` | Optional arguments (`DisplayParameters`) that can be passed on to the `DataTrack`. Refer to Gviz help and vignette for a list of arguments.

### Value

This function returns an object of class `DataTrack`.

### Author(s)

Renan Sauteraud

### See Also

`segmentPING` `plotSummary` `DataTrack` `plotTracks`

[Package PING version 2.30.0 Index]