visualizeArea {OmicsLonDA} | R Documentation

## Visualize significant time interval

### Description

Visualize significant time interval

### Usage

    visualizeArea(omicslonda_object = NULL, fit.method = "ssgaussian",
      text = "FeatureName", unit = "days", ylabel = "Normalized Count",
      col = c("blue", "firebrick"), prefix = "Test")

### Arguments

`omicslonda_object` | The returned object from omicslonda analysis
`fit.method` | Fitting method (ssgaussian)
`text` | Feature name
`unit` | time unit used in the Time vector (hours, days, weeks, months, etc.)
`ylabel` | text to be shown on the y-axis of all generated figures (default: "Normalized Count")
`col` | two color to be used for the two groups (eg., c("red", "blue")).
`prefix` | prefix to be used to create directory for the analysis results

### Value

null

### References

Ahmed Metwally (ametwall@stanford.edu)

### Examples

    library(SummarizedExperiment)
    data(omicslonda_data_example)
    visualizeArea(omicslonda_object = omicslonda_data_example$omicslonda_results,
                     fit.method = "ssgaussian",
                     text = "Feature_1", unit = "days",
                     ylabel = "Normalized Count", col =
                     c("blue", "firebrick"), prefix = tempfile())

[Package OmicsLonDA version 1.2.2 Index]