A {MineICA} | R Documentation

## Retrieve and set Source S and Mixing matrix A from IcaSet

### Description

These generic functions access and set the attributes `S, SByGene` and `A` stored in an object of class `IcaSet`.

### Usage

    S(object)
    S(object) <- value
    SByGene(object)
    SByGene(object) <- value
    A(object)
    A(object) <- value
    nbComp(object)

### Arguments

`object` | object of class `IcaSet`
`value` | Data.frame with rows representing: features (for `S`), genes (for `SByGene`), or samples (for `A`) and columns representing components.

### Value

`S` returns a data.frame containing feature projection values; `SByGene` returns a data.frame containing gene projection values; `A` returns a data.frame containing sample contribution values. `nbComp` returns the number of components, i.e the number of columns of `A`.

### Author(s)

Anne Biton

[Package MineICA version 1.26.0 Index]