HS_conv_id {MiRaGE} | R Documentation

## miRNA conservation table generation function

### Description

This function generates conv_id, which describes conservation information of each human miRNA, from the scratch

### Usage

    HS_conv_id(taxid=9606,species="hsa",destdir="./")

### Arguments

`taxid` | taxon id for human. Default is 9606
`species` | Three characters string which describe human. Default is "hsa".
`destdir` | Directory where "HS_conv_id" is saved. Default is "./".

### Details

This function computes conv_id, which describes conservation information of each human miRNA, used in the MiRaGE server described in Yoshizawa et al (2011). It saves data frame conv_id as the name of "HS_conv_id" in the destination directory.

### References

Yoshizawa, M., Taguchi, Y-h., and Yasuda, J. (2011), Inference of Gene Regulation via miRNAs During ES Cell Differentiation Using MiRaGE Method. Int J Mol Sci 12(12):9265-9276

### Examples

    ## Not run: HS_conv_id()

[Package MiRaGE version 1.28.0 Index]