TBL2_HS_gen {MiRaGE} | R Documentation

## The target genes table for human miRNAs

### Description

This function generates target gene tables for human miRNAs base upon simple seed match toward 3' UTR of target genes

### Usage

    TBL2_HS_gen(SP="hsa",destdir="./")

### Arguments

`SP` | Three characters string which describe human. Default is "hsa".
`destdir` | Directory where "TBL2_HS" is saved. Default is "./".

### Details

This function generates target gene tables for human miRNAs, used in the MiRaGE server described in Yoshizawa et al (2011). It saves data frame "TBL2" as the name of "TBL2_HS" in the destination directory.

### References

Yoshizawa, M., Taguchi, Y-h., and Yasuda, J. (2011), Inference of Gene Regulation via miRNAs During ES Cell Differentiation Using MiRaGE Method. Int J Mol Sci 12(12):9265-9276

### Examples

    ## Not run: TBL2_HS_gen()

[Package MiRaGE version 1.28.0 Index]