getProbeResults {MEAL} | R Documentation

## Obtain probe results from a `ResultSet`

### Description

It computes the statistics from the `MArrayLM` computed with `DiffMeanAnalysis` or `DiffVarAnalysis`. This function allows to specify the contrasts and to get F-statistics for a group of variables.

### Usage

    getProbeResults(object, rid = "DiffMean", coef = 2, contrast = NULL,
      fNames = c("chromosome", "start"), ...)

### Arguments

`object` | ResultSet
`rid` | Name of the results: "DiffMean" for mean differences, "DiffVar" for variance differences. (Default: DiffMean)
`coef` | Number of the coefficient used to compute the statistics. If a vector is supplied, F-statistics evaluating the global effect of the coefficients are computed. (Default: 2).
`contrast` | Matrix of contrasts
`fNames` | Names of the columns of `object` fData that will be added to the results data.frame.
`...` | Further arguments passed to `getAssociation`.

### Value

data.frame with the probe results.

[Package MEAL version 1.16.0 Index]