# Linear model and normality based normalization and transformation method (Linnorm)

## Documentation for package ‘Linnorm’ version 2.10.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

Islam2011 | scRNA-seq data from Islam et al. 2011
LIHC | Partial RNA-seq data from TCGA LIHC (Liver Hepatocellular Carcinoma)
LinearRegression | One Pass Linear Regression.
LinearRegressionFP | One Pass Linear Regression with fixed point.
Linnorm | Linnorm Normalizing Transformation Function
Linnorm.Cor | Linnorm-gene correlation network analysis.
Linnorm.DataImput | Linnorm Data Imputation Function. (In development)
Linnorm.HClust | Linnorm-hierarchical clustering analysis.
Linnorm.HVar | Linnorm-Hvar pipeline for highly variable gene discovery.
Linnorm.limma | Linnorm-limma pipeline for Differentially Expression Analysis
Linnorm.Norm | Linnorm Normalization Function
Linnorm.PCA | Linnorm-PCA Clustering pipeline for subpopulation Analysis
Linnorm.SGenes | Linnorm model stable gene selection tool.
Linnorm.tSNE | Linnorm t-SNE Clustering pipeline for subpopulation Analysis
RnaXSim | This function simulates an RNA-seq dataset based on a given distribution.
SEQC | Partial RNA-seq data from SEQC/MAQC-III Sample A