RNAseqQA {KnowSeq} | R Documentation

## RNAseqQA performs the quality analysis of an expression matrix.

### Description

RNAseqQA performs the quality analysis of an expression matrix. This function adapts the RNA-seq data in order to allows using arrayQualityMetrics expression analysis.

### Usage

    RNAseqQA(expressionMatrix, outdir = "RNAseqQA")

### Arguments

`expressionMatrix` | A matrix that contains the gene expression values.
`outdir` | The output directory to store the report of arrayQualityMetrics

### Value

Nothing to return.

### Examples

    dir <- system.file("extdata", package="KnowSeq")
    load(paste(dir,"/expressionExample.RData",sep = ""))

    RNAseqQA(expressionMatrix)

[Package KnowSeq version 1.0.0 Index]