hmec.IS {HiCcompare} | R Documentation

## Hi-C data from HMEC cell line - chromosome 22 at 500kb resolution

### Description

An InteractionSet object 2490 interactions and 1 metadata column containing the Interaction Frequencies

### Usage

    hmec.IS

### Format

An InteractionSet with 2490 rows and 1 metadata column:

IF

  The Interaction Frequency - number of read counts found for the interaction between region1 and region2

### Value

A matrix

### Source

Data from the Aiden Lab. See their website at http://www.aidenlab.org/ Or the the GEO link to download the data https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE63525

[Package HiCcompare version 1.8.0 Index]