bfc460fff57a37f54d529f1321f96645 *DESCRIPTION
04ccdbaca6b434a28847abc114122545 *INDEX
ed5e290dcf2f4891cc8744e4e633f3d5 *Meta/Rd.rds
b5a610931b0d6a08d75f06d0d96527bf *Meta/data.rds
145bf2c78f999791e0c372db36ed6d7a *Meta/features.rds
a7bd0734dda530d38d3aaed1e345bc32 *Meta/hsearch.rds
eec9ed39647824562e1d9f19d8bf8936 *Meta/links.rds
56809834892043f4ee3b1d89e5e75b04 *Meta/nsInfo.rds
8a5a297ccb763138dafa02d2f1be5ebc *Meta/package.rds
f303eddb2ac55a8bf67db831d483856b *Meta/vignette.rds
12623801abce9e26615688a7b1117a4b *NAMESPACE
72ecd186ff9413b48ea2929bb815ed34 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/GenomicInteractions
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8fc84e038ea546a0f1e12c824b2f5b10 *R/GenomicInteractions.rdx
398558e5248b1a617c42f5fe6c1ad024 *data/hg19.refseq.transcripts.rda
d976d748baf9338534b53095b4433f0f *data/hic_example_data.rda
e738b2c892fd3a5023e8d0a9cc9dc787 *data/mm9_refseq_promoters.rda
f3be44c2045c0287f3e042d3e80a710b *data/thymus_enhancers.rda
225fe3b2ad316e214b5a54366aa18210 *doc/chiapet_vignette.R
93c9a2038c863fc293c70519efb9fe45 *doc/chiapet_vignette.html
1aec73444f76ab4e96307fc29f591682 *doc/chiapet_vignette.rmd
8f4576836a31714d7f8e58a3e2dd1de7 *doc/hic_vignette.R
c0f756d66f273869519f0c22efc34230 *doc/hic_vignette.Rmd
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9597385754aedab651758fc993b6d01e *doc/index.html
8f4732d26550d64a9dee4252097063a1 *extdata/Seitan2013_WT_100kb_interactions.txt
adc8c65e7510394df1e46053c58796db *extdata/k562.rep1.cluster.pet3+.txt
737c74fca5b7b894901f6c3695a6a680 *help/AnIndex
42b3a8277e0de15c48b6de9275d7caf6 *help/GenomicInteractions.rdb
3d6df030912338c64a15141e9cc29496 *help/GenomicInteractions.rdx
e849607d014407666cb1805c00068d58 *help/aliases.rds
c60dc562dc81a2f20d73ad8ae50d118c *help/paths.rds
4e35822e737d347655fdeb09f2104f22 *html/00Index.html
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6d0509c2f2b2c01f983812c361735ce3 *html/GenomicInteractions.html
20726954656854b0122c6daad412c5b5 *html/InteractionHelpers.html
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0108af6afa41b9dcde5547bdb90cc4a7 *html/InteractionTrack.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
0c027cfcff70cc9188783a817350388f *html/annotateInteractions.html
353dd90ab9a37cc623f556581c0b6ac0 *html/annotateRegions.html
1c20f3cac21470e98bbb9920f61b581c *html/asBED-GInteractions-method.html
42e9d4983382aced986105507057c2c6 *html/availableDisplayPars.html
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7bc8c08e998866eca1b84cba51e0ae48 *html/countsBetweenAnchors-methods.html
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a968aa0cb4821d7c498696124ec90bf6 *html/export.bed12.html
42edb0a485e7ce233f705412dafa6013 *html/export.bedpe.html
e56402535f153e05590ef21f0cdc309b *html/export.chiasig.html
cfa3c322b5283d6af657862577aacde2 *html/export.igraph.html
3ac8666a83be1b364a5545718b64ced5 *html/get_binom_ligation_threshold.html
5b2d914ac6130507a3b40ef231353da1 *html/get_self_ligation_threshold.html
5e25ea2cece99f74f449ed4863cf29e6 *html/getters.html
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25381e8579328f83658368444b856ccd *html/makeGenomicInteractionsFromFile.html
7da096ed6879bb2577cf724079e8f48c *html/mm9_refseq_promoters.html
0588a452a329eac2aa77b52b895a654b *html/plotAvgViewpoint.html
345dffe761cca95460a1981ff450dbee *html/plotCisTrans.html
d08c01eb0449876d835a82e47dad3262 *html/plotCounts.html
8ee4552ecb798a9bc29f65f6c2d97cad *html/plotDists.html
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8da64fc1af88c6037cdf9ecaa2772133 *html/plotSummaryStats.html
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7a96326cc4a224726cdc941e28a69c31 *html/removeDups.html
43a343c8d2f58fd76da5302f6717f0c0 *html/resetAnnotations.html
9f4396ef354033f4096eb33ee3c2af82 *html/sameStrand.html
dc8b876c85fc0c090ad96ed2a0bad6d2 *html/setters.html
ad432619527c36c095fad2bb5a47b0e7 *html/sum-GInteractions-method.html
6130a002d24f81d97771792fcd65980c *html/summariseByFeaturePairs.html
2962218054fdbfc57d133ceef424cf8b *html/summariseByFeatures.html
5efdafad9daabe22f2e0ae54ce33d768 *html/thymus_enh.html
3bc2fc9a865b2f021f736f1b8f357a16 *html/updateObject-GenomicInteractions-method.html
15d7680f790c9fcef3ee6855270d85d5 *html/viewPoint.html
