pgInMemLoc-class {FindMyFriends} | R Documentation

## Superclass for gene location aware pangenome

### Description

This virtual class is the superclass for all standard, location aware, pangenome classes in FindMyFriends. It stores all chromosomal information in a data.frame.

### Slots

`geneLocation`

  A data.frame containing the columns 'contig', 'start', 'end' and 'strand' and a row for each gene in the pangenome.

### See Also

Other Pangenome_classes: `pgFull-class`, `pgFullLoc-class`, `pgInMem-class`, `pgLM-class`, `pgLMLoc-class`, `pgSlim-class`, `pgSlimLoc-class`, `pgVirtual-class`, `pgVirtualLoc-class`

[Package FindMyFriends version 1.16.0 Index]