orgInfo {FindMyFriends} | R Documentation

## Get and set information about organisms

### Description

These methods lets you access the information stored about each organism and add to it or modify it. The only information present up front is the number of genes present in each organism. While possible, this information should not be changed manually but through the `removeGene` functions.

### Usage

    orgInfo(object)

    orgInfo(object) <- value

    ## S4 method for signature 'pgInMem'
    orgInfo(object)

    ## S4 replacement method for signature 'pgInMem'
    orgInfo(object) <- value

### Arguments

`object` | A pgVirtual subclass
`value` | A data.frame with a row for each organism

### Value

In case of the getter a data.frame with organism information.

### Methods (by class)

- `pgInMem`: Get organism metadata for pgInMem subclasses

- `pgInMem`: Set organism metadata for pgInMem subclasses

### Note

Required for subclasses of pgVirtual in order to extend the class system of FindMyFriends

### See Also

Other Metadata: `addGroupInfo`, `addOrgInfo`, `groupInfo`

### Examples

    testPG <- .loadPgExample()
    orgInfo(testPG)

    orgInfo(testPG)$Genus <- 'Mycoplasma'

[Package FindMyFriends version 1.16.0 Index]