fitInfo {DESeq} | R Documentation

## Accessor function for the fitInfo objects in a CountDataSet

### Description

After calling `estimateDispersions`, a CountDataSet object is populated with one or (in case of a “per-condition” estimation) several fitInfo objects, which can be accessed with this function.

### Usage

    fitInfo( cds, name=NULL )

### Arguments

`cds` | a CountDataSet
`name` | if `estimateDispersion` was called with `method="per-condition"` a name hasd to specified. Try `ls(cds@fitInfo`.

### Author(s)

Simon Anders, sanders@fs.tum.de

### See Also

`estimateDispersions`

### Examples

       cds <- makeExampleCountDataSet()
       cds <- estimateSizeFactors( cds )
       cds <- estimateDispersions( cds )
       str( fitInfo( cds ) )

[Package DESeq version 1.38.0 Index]