TSS.mouse.NCBIM37 {ChIPpeakAnno} | R Documentation

## TSS annotation data for mouse (NCBIM37) obtained from biomaRt

### Description

TSS annotation data for mouse (NCBIM37) obtained from biomaRt

### Usage

    data(TSS.mouse.NCBIM37)

### Format

GRanges with slot start holding the start position of the gene, slot end holding the end position of the gene, slot names holding ensembl gene id, slot seqnames holding the chromosome location where the gene is located and slot strand holding the strinad information. In addition, the following variables are included.

`description`

  description of the gene

### Details

Annotation data obtained by:

mart = useMart(biomart = "ensembl", dataset = "mmusculus_gene_ensembl")

getAnnotation(mart, featureType = "TSS")

### Examples

    data(TSS.mouse.NCBIM37)
    slotNames(TSS.mouse.NCBIM37)

[Package ChIPpeakAnno version 3.20.1 Index]