getBigWigFile {ChIPSeqSpike} | R Documentation

## Get the path to an endogenous experiment bigwig file

### Description

Access and returns the path to the endogenous bigwig file of an experiment

### Usage

    getBigWigFile(theObject)

    ## S4 method for signature 'ChIPSeqSpikeDataset'
    getBigWigFile(theObject)

    ## S4 method for signature 'ChIPSeqSpikeDatasetList'
    getBigWigFile(theObject)

    ## S4 method for signature 'ChIPSeqSpikeDatasetBoost'
    getBigWigFile(theObject)

    ## S4 method for signature 'Experiment'
    getBigWigFile(theObject)

    ## S4 method for signature 'ExperimentLoaded'
    getBigWigFile(theObject)

    ## S4 method for signature 'ChIPSeqSpikeCore'
    getBigWigFile(theObject)

### Arguments

`theObject` | A `ChIPSeqSpikeCore`, `ChIPSeqSpikeDataset`, `ChIPSeqSpikeDatasetList`, `ChIPSeqSpikeDatasetBoost`, `Experiment` or `ExperimentLoaded` object

### Details

If the object is ChIPSeqSpikeCore, ChIPSeqSpikeDataset or ChIPSeqSpikeDatasetBoost, getBigWigFile returns the path to the endogenous input DNA experiment bigwig file.

If the object is Experiment or ExperimentLoaded, getBigWigFile returns the path to the endogenous experiment bigwig file.

If the object is ChIPSeqSpikeDatasetList, all bigwig files associated with all dataset are returned at once.

### Value

A string of the path to the endogenous bigwig file

### Author(s)

Nicolas Descostes

### Examples

    data(result_extractBinding)
    getBigWigFile(csds)

[Package ChIPSeqSpike version 1.6.0 Index]