82c00b01afab8cc7247470e55d2775e7 *CITATION
e21b17de61530f427e01c66d52d19209 *DESCRIPTION
7cba324e068e87cb387ecfb23ef44ab7 *INDEX
4ff32166280978beeeb3bceb35f826c1 *Meta/Rd.rds
a4081712be3649fee57cb72b810cc0f9 *Meta/features.rds
7f866da87a9f8f74ceb4a34c4bf4ed29 *Meta/hsearch.rds
343c51668e8364c76e3c9bac25154494 *Meta/links.rds
d9a89d63babf884d37d7995e5c00be46 *Meta/nsInfo.rds
fc1c8dc138ca165d8bd6d70dd3273f38 *Meta/package.rds
1a1477e5184bb691bd3c2f37132256d9 *Meta/vignette.rds
fb2f09a9ac778560823fe610bc127c50 *NAMESPACE
50bf515341fb7350db3cb7849d9fdf35 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/CHRONOS
9f15e81acb79415c86b82deb945f74ce *R/CHRONOS.rdb
4673d35b6e22183d4d5278e655f0acc1 *R/CHRONOS.rdx
397602b565a494a6baef4802e8f2a069 *doc/CHRONOS.R
7cbdd0127ad5f77a0ee7c6ee3b48063a *doc/CHRONOS.Rmd
c73c57cd99f4e8a4f11326dcbbaede99 *doc/CHRONOS.pdf
f9260aa5f28bca1bcb77cbf2f18f4926 *doc/index.html
8d1c8068f1e84c53b28cbe095f4801f5 *extdata/Downloads/KEGG/hsa/hsa04915.xml
40ef2ba0fbdc3b2a3a78eddadb990099 *extdata/Downloads/KEGG/hsa/hsa04917.xml
bd05b84234ad3f33ae6ea7516c7f4f97 *extdata/Downloads/KEGG/hsa/hsa04930.xml
263f5c1323dd479aa9781f0455f831ca *extdata/Downloads/KEGG/hsa/hsa05031.xml
5c86930303076b56fffb2124659ee722 *extdata/Downloads/mirbase/miRNAmaps_cel.RData
a0cb7ea78b15e55988d9ac247456bcbe *extdata/Downloads/mirbase/miRNAmaps_cfa.RData
20656607818c5a6e0f0999336c998947 *extdata/Downloads/mirbase/miRNAmaps_dme.RData
6ac71ed83a95d7c3be06257ba71cfe4c *extdata/Downloads/mirbase/miRNAmaps_dre.RData
d801f193d9043e618fc4db0cd5a12bab *extdata/Downloads/mirbase/miRNAmaps_gga.RData
848308837e8a4b8c8c9dda5b2b3b0338 *extdata/Downloads/mirbase/miRNAmaps_hsa.RData
f26276ab1d447631f168ed71619f0300 *extdata/Downloads/mirbase/miRNAmaps_mmu.RData
d886c18f5539936ff080e8a078f91513 *extdata/Downloads/mirbase/miRNAmaps_oar.RData
61f80721ee625b915c5e278e32f1878d *extdata/Downloads/mirbase/miRNAmaps_rno.RData
ba0338a0619071b90c76159b19b7dda0 *extdata/Examples/data.RData
8d1c8068f1e84c53b28cbe095f4801f5 *extdata/Examples/kgml/hsa04915.xml
40ef2ba0fbdc3b2a3a78eddadb990099 *extdata/Examples/kgml/hsa04917.xml
bd05b84234ad3f33ae6ea7516c7f4f97 *extdata/Examples/kgml/hsa04930.xml
263f5c1323dd479aa9781f0455f831ca *extdata/Examples/kgml/hsa05031.xml
80be6b7034da70420088ae883e122025 *extdata/User/TarBase.xlsx
b73847dc20f74e19d50f266e54a900a9 *extdata/User/interestingGenes.txt
f5bd80c56bd4310f22a950f561b4db72 *extdata/User/mRNAexpressions.txt
6209f09eb733f87ac17256483bfcef3a *extdata/User/miRNAexpressions.txt
6da5e89fa7bb7b55bef94a3f3fbeb067 *extdata/User/miRecords.xlsx
67b9999ac058bfbe67206f9d90700dbe *help/AnIndex
a0d8924cbc9b1280d1833c01a02ed702 *help/CHRONOS.rdb
708f766beeaef37736fd0c8952d68052 *help/CHRONOS.rdx
c865d1400e9c36ffa9c586d93ff5b7c8 *help/aliases.rds
20cb6b4f3749643940efe45bcf8acca0 *help/paths.rds
eba8c15d5389b5ee673c746c0d28df3b *html/00Index.html
2724be312de8f21b504a17277d90a70c *html/CHRONOSrun.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
331786e63d05069239644cac0593503b *html/convertMiRNANomenclature.html
efa65ed3a5cca657b87b43ec6e2c3ee2 *html/convertNomenclature.html
6a9b9f42f3240f23acf4766f4cfcca1f *html/createPathwayGraphs.html
47c904315057d9390ff730168d621f4c *html/downloadKEGGPathwayList.html
9e5e04d4e60a16bbf326229d314a6969 *html/downloadMiRecords.html
93bc60943948618285cbd050c09ae040 *html/downloadPathways.html
ad30f46aa2e837331a4ea87bf30652b5 *html/extractLinearSubpathways.html
f9a78fbf99910b39d3ab65fa819de8ab *html/extractNonLinearSubpathways.html
da4f29f8da95d2633c8e433c2a36f807 *html/getEdgeTypes.html
54e544e089ec4d12a132dcb81e6c2814 *html/importExpressions.html
ecdc047012228719fa8e3b7c937f085f *html/pathwayMeasures.html
7eae6408317a019520671298e53e8ab0 *html/scoreSubpathways.html
8fbf31429ce3a4e8ebbf7cc42de0e4b7 *html/subpathwayKEGGmap.html
b04db7fa4f6fa8e8354b575d7733f06e *html/subpathwayMiRNAs.html
5685d8ec47ff3d9d3b3f9bc1daa3d628 *html/visualizeResults.html
4618e85cf7e05a7a8a825e6203258c4d *java/CHRONOS.jar
f26364f968916f546b7b86cf122f27c3 *unitTests/test_CHRONOSrun.R
4f7aefd3040ac2c26db999d47096f53d *unitTests/test_pathwayToGraph.R
3d1e948699f5b4b9d0c25fa99afce3c6 *unitTests/test_subExtractionLinear.R
b5a2804bef03d6cca7315e983cd6852d *unitTests/test_subExtractionNonLinear.R
8c9ceaeb0876827e50e9468aadb3f67b *unitTests/test_subRefinement.R
3100a07ec828065bfc818a701ef293e3 *unitTests/test_subVisualization.R
