consensusClustersTpm {CAGEr} | R Documentation

## Extracting consensus clusters tpm matrix from CAGEset object

### Description

Extracts a table with normalized CAGE tag values for consensus clusters across all samples from a `CAGEr` object.

### Usage

    consensusClustersTpm(object)

    ## S4 method for signature 'CAGEset'
    consensusClustersTpm(object)

    ## S4 method for signature 'CAGEexp'
    consensusClustersTpm(object)

### Arguments

`object` | A CAGEr object.

### Value

Returns the `matrix` of normalized expression values of CAGE clusters across all samples.

### Author(s)

Vanja Haberle

### See Also

`consensusClusters`

### Examples

    head(consensusClustersTpm(exampleCAGEset))
    head(consensusClustersTpm(exampleCAGEexp))

[Package CAGEr version 1.28.0 Index]